Installation

Pip

The easiest way is to install ViSiAnnoT with pip:

$ pip install visiannot

You may need to call pip3 instead.

From source

You may install ViSiAnnoT from source:

$ git clone https://github.com/RphWbr/visiannot
$ cd visiannot
$ pip install .

Depedencies

ViSiAnnoT requires Python 3.6+.

It is cross-platform and has been tested on Windows 7/10, Ubuntu 16/18/20 and MacOS Mojave/Catalina.

The following packages are required and are automatically installed with pip:

Run ViSiAnnoT

Once it is installed, you can launch ViSiAnnoT with the following command line:

$ python3 -m visiannot

First, the configuration GUI will open, see chapter User guide: configuration. Then the ViSiAnnoT GUI will open, see chapter User guide: ViSiAnnoT.

In order to familiarize with ViSiAnnoT, an example of dataset is provided on GitHub. You may download or clone this repository on your computer.